Dear all,
It's been two years since I've started to work in bioinformatics with Smalltalk. It has been a difficult decision because the quality and amount of bioinformatics libraries is absolutely amazing, but I've received a lot of support from the main researchers at the Institute of Genetics where I'm working in Argentina. Now the initial step for a BioSmalltalk release is done. I hope the FOSS community receive this pre-release as the basis for future enhacements for bioinformatics with any Smalltalk flavor. Although in the short-term it is unlikely for a BioSmalltalk to reach the users, maturity and competitive level of major Bio* toolkits (BioPerl, BioPython, BioRuby or BioJava), it could take too many years more if I continue this work alone. However, BioSmalltalk was not conceived to replace or defeat any other similar packages, but to provide to the bioinformatics community the features of a pure object system. So feel free to spread the word for all bioinformaticians, newcomers, developers, or life scientists, for helping in any way and discovering why Smalltalk is such a special environment. This release was implemented in Pharo 1.3 custom Core, but cross Smalltalk portability was a priority. I'm working now to release versions for GemStone, Squeak and VisualWorks is there is enough interest. Everybody is welcome to contribute. You may download a pre-compiled release from the project page: http://code.google.com/p/biosmalltalk/ Best regards, Hernán -- Hernán Morales Institute of Veterinary Genetics (IGEVET). National Scientific and Technical Research Council (CONICET). La Plata (1900), Buenos Aires, Argentina. Telephone: +54 (0221) 421-1799. Internal: 422 Fax: 425-7980 or 421-1799. _______________________________________________ vwnc mailing list [hidden email] http://lists.cs.uiuc.edu/mailman/listinfo/vwnc |
Thanks hernan!
Stef On Mar 15, 2012, at 1:32 PM, Hernán Morales Durand wrote: > Dear all, > > It's been two years since I've started to work in bioinformatics with > Smalltalk. It has been a difficult decision because the quality and > amount of bioinformatics libraries is absolutely amazing, but I've > received a lot of support from the main researchers at the Institute > of Genetics where I'm working in Argentina. > > Now the initial step for a BioSmalltalk release is done. I hope the > FOSS community receive this pre-release as the basis for future > enhacements for bioinformatics with any Smalltalk flavor. Although in > the short-term it is unlikely for a BioSmalltalk to reach the users, > maturity and competitive level of major Bio* toolkits (BioPerl, > BioPython, BioRuby or BioJava), it could take too many years more if I > continue this work alone. However, BioSmalltalk was not conceived to > replace or defeat any other similar packages, but to provide to the > bioinformatics community the features of a pure object system. So feel > free to spread the word for all bioinformaticians, newcomers, > developers, or life scientists, for helping in any way and discovering > why Smalltalk is such a special environment. > > This release was implemented in Pharo 1.3 custom Core, but cross > Smalltalk portability was a priority. I'm working now to release > versions for GemStone, Squeak and VisualWorks is there is enough > interest. Everybody is welcome to contribute. > > You may download a pre-compiled release from the project page: > http://code.google.com/p/biosmalltalk/ > > Best regards, > > Hernán > > > -- > Hernán Morales > Institute of Veterinary Genetics (IGEVET). > National Scientific and Technical Research Council (CONICET). > La Plata (1900), Buenos Aires, Argentina. > Telephone: +54 (0221) 421-1799. > Internal: 422 > Fax: 425-7980 or 421-1799. > _______________________________________________ vwnc mailing list [hidden email] http://lists.cs.uiuc.edu/mailman/listinfo/vwnc |
In reply to this post by hernanmd
thanks a lot hernan for your work
Stef On Mar 15, 2012, at 1:32 PM, Hernán Morales Durand wrote: > Dear all, > > It's been two years since I've started to work in bioinformatics with > Smalltalk. It has been a difficult decision because the quality and > amount of bioinformatics libraries is absolutely amazing, but I've > received a lot of support from the main researchers at the Institute > of Genetics where I'm working in Argentina. > > Now the initial step for a BioSmalltalk release is done. I hope the > FOSS community receive this pre-release as the basis for future > enhacements for bioinformatics with any Smalltalk flavor. Although in > the short-term it is unlikely for a BioSmalltalk to reach the users, > maturity and competitive level of major Bio* toolkits (BioPerl, > BioPython, BioRuby or BioJava), it could take too many years more if I > continue this work alone. However, BioSmalltalk was not conceived to > replace or defeat any other similar packages, but to provide to the > bioinformatics community the features of a pure object system. So feel > free to spread the word for all bioinformaticians, newcomers, > developers, or life scientists, for helping in any way and discovering > why Smalltalk is such a special environment. > > This release was implemented in Pharo 1.3 custom Core, but cross > Smalltalk portability was a priority. I'm working now to release > versions for GemStone, Squeak and VisualWorks is there is enough > interest. Everybody is welcome to contribute. > > You may download a pre-compiled release from the project page: > http://code.google.com/p/biosmalltalk/ > > Best regards, > > Hernán > > > -- > Hernán Morales > Institute of Veterinary Genetics (IGEVET). > National Scientific and Technical Research Council (CONICET). > La Plata (1900), Buenos Aires, Argentina. > Telephone: +54 (0221) 421-1799. > Internal: 422 > Fax: 425-7980 or 421-1799. > _______________________________________________ vwnc mailing list [hidden email] http://lists.cs.uiuc.edu/mailman/listinfo/vwnc |
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