Hi,
To show how Moose can support the analysis of various data sets, I am looking for a case study containing a complex data structure that does not represent a software system, and a set of questions associated with it. Ideally, the data should be freely available and it should contain a set of entities with various properties and various relationships with other entities. Anyone has any idea regarding such a case study? Cheers, Doru -- www.tudorgirba.com "There are no old things, there are only old ways of looking at them." _______________________________________________ Moose-dev mailing list [hidden email] https://www.iam.unibe.ch/mailman/listinfo/moose-dev |
Hi Doru!
I like swimming. Swimovate is a watch that makes a geek swimmer happy: it records set and provides numerous data. Data is structured as a tree, not really a graph, even thought this is not impossible to find a graph structure. I worked on analyzing swimming sets in moose. I haven't released the code yet. Does this go in what you're asking for? Cheers, Alexandre Le 4 sept. 2011 à 19:46, Tudor Girba <[hidden email]> a écrit : > Hi, > > To show how Moose can support the analysis of various data sets, I am looking for a case study containing a complex data structure that does not represent a software system, and a set of questions associated with it. Ideally, the data should be freely available and it should contain a set of entities with various properties and various relationships with other entities. > > Anyone has any idea regarding such a case study? > > Cheers, > Doru > > -- > www.tudorgirba.com > > "There are no old things, there are only old ways of looking at them." > > > > > _______________________________________________ > Moose-dev mailing list > [hidden email] > https://www.iam.unibe.ch/mailman/listinfo/moose-dev _______________________________________________ Moose-dev mailing list [hidden email] https://www.iam.unibe.ch/mailman/listinfo/moose-dev |
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On 5 sept. 2011, at 01:46, Tudor Girba wrote: > Hi, > > To show how Moose can support the analysis of various data sets, I am looking for a case study containing a complex data structure that does not represent a software system, and a set of questions associated with it. Ideally, the data should be freely available and it should contain a set of entities with various properties and various relationships with other entities. > > Anyone has any idea regarding such a case study? A classic is analysis of "grouping/following" in orienteering, based on split times for each leg and each runner. http://news.worldofo.com/2006/10/06/wc-one-two-three-many/ http://news.worldofo.com/2008/05/29/grouping-runners-eoc-long-final/ -- Simon Denier _______________________________________________ Moose-dev mailing list [hidden email] https://www.iam.unibe.ch/mailman/listinfo/moose-dev |
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Thanks everyone for the suggestions. I will try to look into them.
Cheers, Doru On 5 Sep 2011, at 07:04, Lukas Renggli wrote: > Stanford has many large graph-like datasets to download: social > networks, web graphs, peer-to-peer networks, shopping networks, road > networks, wikipedia networks, etc. > > http://snap.stanford.edu/data/ > > Lukas > > On 5 September 2011 06:24, Guillermo Polito <[hidden email]> wrote: >> I've used as an example of datamining a dataset about car accidents we got >> from here http://www.nhtsa.gov/NASS . >> >> Hope it helps :) >> Guille >> >> On Sun, Sep 4, 2011 at 11:58 PM, Hernán Morales Durand >> <[hidden email]> wrote: >>> >>> 2011/9/4 Tudor Girba <[hidden email]>: >>>> Hi, >>>> >>>> Thanks, but I am looking for data sets that contained graphs of entities >>>> with properties, rather then numbers. >>>> >>> >>> Oh, that was just the top of the iceberg, look at cellular interaction >>> networks like protein-protein interactions, relations between genes >>> and QTLs, phylogenetic trees, gene ontology classifications, etc. >>> probably they have more "properties" and relationships than you ever >>> imagined. Check for example >>> http://www.nature.com/msb/journal/v3/n1/fig_tab/msb4100166_F2.html or >>> the one from the Human Interactome here >>> http://www.blog.republicofmath.com/archives/2005, or >>> http://www.biomedcentral.com/content/supplementary/1471-2164-9-96-s6.jpeg >>> for Gene Ontology "objects". Also PubMed have thousands of related >>> papers about real case studies. >>> >>>> To give an idea, an example would be a set of persons that have multiple >>>> properties, such as age or function, and have various kinds of relationships >>>> with other persons. Ideally, it should be something containing some more >>>> than 5-10 types of entities. >>>> >>>> Cheers, >>>> Doru >>>> >>>> >>>> On 5 Sep 2011, at 02:51, Hernán Morales Durand wrote: >>>> >>>>> Hi Tudor, >>>>> >>>>> I don't know if you want few data sets or many ones, but for each case >>>>> I found "Selecting genes with dissimilar discrimination strength for >>>>> sample class prediction", report case studies in two real cancer >>>>> microarray datasets (CAR and LUNG) for gene expression profiling. The >>>>> Lymphoma case study in humans contains 30 case study genes, you may >>>>> read about it in "Examples and Applications of Fuzzy Measure >>>>> Similarity Using GO Terms". In general you can find many case studies >>>>> from SNP data experiments doing all kind of predictions, for example >>>>> from protein structure prediction studies that use LiveBench data sets >>>>> (http://en.wikipedia.org/wiki/LiveBench), search for "Consensus fold >>>>> recognition by predicting model quality". >>>>> If you need more or something more specific just ask :) >>>>> Cheers, >>>>> >>>>> Hernán >>>>> >>>>> 2011/9/4 Tudor Girba <[hidden email]>: >>>>>> Hi, >>>>>> >>>>>> To show how Moose can support the analysis of various data sets, I am >>>>>> looking for a case study containing a complex data structure that does not >>>>>> represent a software system, and a set of questions associated with it. >>>>>> Ideally, the data should be freely available and it should contain a set of >>>>>> entities with various properties and various relationships with other >>>>>> entities. >>>>>> >>>>>> Anyone has any idea regarding such a case study? >>>>>> >>>>>> Cheers, >>>>>> Doru >>>>>> >>>>>> -- >>>>>> www.tudorgirba.com >>>>>> >>>>>> "There are no old things, there are only old ways of looking at them." >>>>>> >>>>> >>>> >>>> -- >>>> www.tudorgirba.com >>>> >>>> "Every successful trip needs a suitable vehicle." >>>> >>> >> >> > > > > -- > Lukas Renggli > www.lukas-renggli.ch > -- www.tudorgirba.com "Reasonable is what we are accustomed with." _______________________________________________ Moose-dev mailing list [hidden email] https://www.iam.unibe.ch/mailman/listinfo/moose-dev |
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Links and links with datasets: http://kevinchai.net/datasets
On Mon, Sep 5, 2011 at 1:46 AM, Tudor Girba <[hidden email]> wrote: Hi, -- Andre Hora _______________________________________________ Moose-dev mailing list [hidden email] https://www.iam.unibe.ch/mailman/listinfo/moose-dev |
Thanks, Andre. I will take a look.
Cheers, Doru On 21 Sep 2011, at 23:22, Andre Hora wrote: > Links and links with datasets: http://kevinchai.net/datasets > > On Mon, Sep 5, 2011 at 1:46 AM, Tudor Girba <[hidden email]> wrote: > Hi, > > To show how Moose can support the analysis of various data sets, I am looking for a case study containing a complex data structure that does not represent a software system, and a set of questions associated with it. Ideally, the data should be freely available and it should contain a set of entities with various properties and various relationships with other entities. > > Anyone has any idea regarding such a case study? > > Cheers, > Doru > > -- > www.tudorgirba.com > > "There are no old things, there are only old ways of looking at them." > > > > > _______________________________________________ > Moose-dev mailing list > [hidden email] > https://www.iam.unibe.ch/mailman/listinfo/moose-dev > > > > -- > Andre Hora > > _______________________________________________ > Moose-dev mailing list > [hidden email] > https://www.iam.unibe.ch/mailman/listinfo/moose-dev -- www.tudorgirba.com "We cannot reach the flow of things unless we let go." _______________________________________________ Moose-dev mailing list [hidden email] https://www.iam.unibe.ch/mailman/listinfo/moose-dev |
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